STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gas8Growth arrest-specific 8. (482 aa)    
Predicted Functional Partners:
W5MIG3_LEPOC
Uncharacterized protein.
    
 0.942
W5N3Y4_LEPOC
CoA synthase.
    
 0.942
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 
 0.843
ccdc65
Coiled-coil domain containing 65.
    
 
 0.792
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.689
drc1
Dynein regulatory complex subunit 1 homolog (Chlamydomonas).
  
   
 0.650
W5N3X4_LEPOC
MAX dimerization protein MLX.
     
 0.644
PANK3
Pantothenate kinase 3.
 
      0.643
RSPH1
Radial spoke head component 1.
    
 
 0.638
drc7
Coiled-coil domain containing 135.
  
   
 0.633
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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