Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
UBN1Ubinuclein 1. (1135 aa)    
Predicted Functional Partners:
W5M1F0_LEPOC
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.999
cabin1
Calcineurin binding protein 1.
   
 0.999
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.978
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 0.978
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.722
atrx
ATRX chromatin remodeler, like.
     
 0.695
RBM33
RNA binding motif protein 33.
   
  
 0.693
ergic2
ERGIC and golgi 2.
      
 0.678
LOC102696687
Uncharacterized protein.
      
 0.675
wtap
WT1 associated protein.
      
 0.627
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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