Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dbndd1Si:ch1073-174d20.1. (154 aa)    
Predicted Functional Partners:
W5M519_LEPOC
VPS9 domain containing 1.
      
 0.695
W5N4S4_LEPOC
Dual serine/threonine and tyrosine protein kinase.
      
 0.683
FANCA
FA complementation group A.
      
 0.682
mns1
Meiosis-specific nuclear structural 1.
      
 0.651
ttc14
Tetratricopeptide repeat domain 14.
      
 0.606
W5LYT8_LEPOC
Si:ch1073-174d20.2.
   
  
 0.578
afg3l2
AFG3-like AAA ATPase 2.
   
  
 0.578
def8
Differentially expressed in FDCP 8 homolog.
      
 0.565
znf276
Zinc finger protein 276.
      
 0.553
tpcn2
Uncharacterized protein.
      
 0.524
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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