STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYN9_LEPOCUncharacterized protein. (277 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
    
  0.413
W5MF83_LEPOC
Uncharacterized protein.
    
  0.413
W5MFA5_LEPOC
Nectin cell adhesion molecule 1b.
    
 
0.413
W5MJ54_LEPOC
Uncharacterized protein.
    
 
0.413
W5MJ69_LEPOC
Uncharacterized protein.
    
 
0.413
W5MSQ4_LEPOC
Ig-like domain-containing protein.
    
  0.413
W5MSR5_LEPOC
Nectin cell adhesion molecule 3b.
    
  0.413
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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