Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
svbpSmall vasohibin binding protein. (66 aa)    
Predicted Functional Partners:
vash2
Vasohibin 2.
    
 0.979
VASH1
Vasohibin 1.
    
 0.979
LOC102689884
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
      
 0.688
ttll7
Tubulin tyrosine ligase-like family, member 7.
      
 0.687
W5MQ69_LEPOC
Microtubule-associated protein.
      
 0.675
W5NII6_LEPOC
Tubulin tyrosine ligase.
      
 0.670
W5NII7_LEPOC
Uncharacterized protein.
      
 0.670
LOC102689572
Uncharacterized protein.
      
 0.619
W5MKN7_LEPOC
Uncharacterized protein.
      
 0.619
W5NDA3_LEPOC
Tubulin tyrosine ligase-like family, member 6.
      
 0.524
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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