Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5LYP2_LEPOCADAM metallopeptidase with thrombospondin type 1 motif, 10. (1110 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
     
 0.653
thsd1
Thrombospondin, type I, domain containing 1.
     
 0.641
dennd6b
DENN/MADD domain containing 6B.
      
 0.571
ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif 20.
    
 0.536
ADAMTS19
ADAM metallopeptidase with thrombospondin type 1 motif 19.
    
 0.536
adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9.
    
 0.536
adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12.
    
 0.536
adamts17
ADAM metallopeptidase with thrombospondin type 1 motif, 17.
    
 0.536
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
    
 0.536
clg1h2orf42
Si:ch211-127d4.3.
      
 0.525
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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