Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nsun5NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (484 aa)    
Predicted Functional Partners:
W5M035_LEPOC
Translocated promoter region b, nuclear basket protein.
    
   0.933
noc4l
Nucleolar complex associated 4 homolog.
   
 
 0.917
W5LZD6_LEPOC
Uncharacterized protein.
   
 
 0.902
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.881
W5MKP2_LEPOC
Peter pan homolog; Belongs to the G-protein coupled receptor 1 family.
   
   0.843
nsun6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.830
upf3a
UPF3A regulator of nonsense mediated mRNA decay.
   
   0.815
upf3b
UPF3B regulator of nonsense mediated mRNA decay.
   
   0.815
rpf2
Ribosome production factor 2 homolog.
   
 
 0.796
W5M3K5_LEPOC
Uncharacterized protein.
    
   0.782
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: medium (52%) [HD]