STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYQ7_LEPOCZgc:171967; Belongs to the glycosyl hydrolase 31 family. (758 aa)    
Predicted Functional Partners:
prkcsh
Protein kinase C substrate 80K-H.
 
 
 0.993
LOC102688851
Uncharacterized protein.
 
 
 0.993
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.979
mogs
Mannosyl-oligosaccharide glucosidase.
   
 0.954
W5M044_LEPOC
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.928
AMY1C
Alpha-amylase.
  
 
 0.869
W5MWU6_LEPOC
Calmegin.
    
 0.858
W5N0A0_LEPOC
Calnexin.
    
 0.858
LOC102690812
Si:ch211-274f20.2.
    
 0.857
W5MWT2_LEPOC
Uncharacterized protein.
    
 0.821
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.