Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LYR9_LEPOCReelin domain-containing protein. (135 aa)    
Predicted Functional Partners:
W5NB71_LEPOC
MRP-L46 domain-containing protein.
   
   0.722
LOC102684237
Mitochondrial ribosomal protein L23.
   
 
 0.712
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.697
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.668
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.660
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.659
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.656
W5MEN5_LEPOC
Mitochondrial ribosomal protein L15.
   
   0.654
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.652
mrps35
Mitochondrial ribosomal protein S35.
   
   0.652
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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