STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
api5Apoptosis inhibitor 5. (529 aa)    
Predicted Functional Partners:
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.971
tbc1d23
TBC1 domain family, member 23.
   
   0.572
samm50
SAMM50 sorting and assembly machinery component.
 
    
 0.559
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.519
nfyb
Nuclear transcription factor Y, beta a.
      
 0.480
dhx15
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
  
 0.436
nt5dc3
5'-nucleotidase domain containing 3.
      
 0.434
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
      
 0.434
LOC102693503
WAS protein family homolog 1.
      
 0.434
ddx42
DEAD (Asp-Glu-Ala-Asp) box helicase 42.
   
 
 0.433
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.