Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LYT6_LEPOCUncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (261 aa)    
Predicted Functional Partners:
W5NCY5_LEPOC
Ornithine decarboxylase antizyme 2b.
    
 0.952
W5MFD2_LEPOC
Ornithine decarboxylase antizyme 1a.
    
 0.945
W5MV52_LEPOC
Ornithine decarboxylase antizyme 1b.
    
 0.945
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.917
sms
Spermine synthase.
  
 0.916
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.805
W5NG10_LEPOC
Aminoadipate-semialdehyde synthase.
  
 
 0.801
W5M1I6_LEPOC
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.796
amd1
S-adenosylmethionine decarboxylase proenzyme.
 
 
 
 0.796
W5M4H7_LEPOC
NAD(P)H dehydrogenase, quinone 1.
    
  0.762
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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