rprd1b protein (Lepisosteus oculatus) - STRING interaction network

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Score

rprd1b

Regulation of nuclear pre-mRNA domain containing 1B. (336 aa)

Predicted Functional Partners:

rpap2

0.965

W5MHD1_LEPOC

0.950

polr2a

0.949

polr2b

0.936

polr2c

0.935

polr2d

0.935

polr2e

0.934

polr2i

0.933

polr2f

0.932

W5NG82_LEPOC

0.920

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5MHD1_LEPOC	W5NG82_LEPOC	ENSLOCP00000007790	ENSLOCP00000019641	Regulation of nuclear pre-mRNA domain containing 2a.	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	0.833
W5MHD1_LEPOC	polr2a	ENSLOCP00000007790	ENSLOCP00000017105	Regulation of nuclear pre-mRNA domain containing 2a.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.830
W5MHD1_LEPOC	polr2b	ENSLOCP00000007790	ENSLOCP00000014052	Regulation of nuclear pre-mRNA domain containing 2a.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.912
W5MHD1_LEPOC	polr2c	ENSLOCP00000007790	ENSLOCP00000003805	Regulation of nuclear pre-mRNA domain containing 2a.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.879
W5MHD1_LEPOC	polr2d	ENSLOCP00000007790	ENSLOCP00000011102	Regulation of nuclear pre-mRNA domain containing 2a.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.861
W5MHD1_LEPOC	polr2e	ENSLOCP00000007790	ENSLOCP00000005510	Regulation of nuclear pre-mRNA domain containing 2a.	RNA polymerase II subunit E.	0.881
W5MHD1_LEPOC	polr2f	ENSLOCP00000007790	ENSLOCP00000014541	Regulation of nuclear pre-mRNA domain containing 2a.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.847
W5MHD1_LEPOC	polr2i	ENSLOCP00000007790	ENSLOCP00000018247	Regulation of nuclear pre-mRNA domain containing 2a.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.849
W5MHD1_LEPOC	rpap2	ENSLOCP00000007790	ENSLOCP00000005666	Regulation of nuclear pre-mRNA domain containing 2a.	RNA polymerase II associated protein 2.	0.991
W5MHD1_LEPOC	rprd1b	ENSLOCP00000007790	ENSLOCP00000001294	Regulation of nuclear pre-mRNA domain containing 2a.	Regulation of nuclear pre-mRNA domain containing 1B.	0.950
W5NG82_LEPOC	W5MHD1_LEPOC	ENSLOCP00000019641	ENSLOCP00000007790	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Regulation of nuclear pre-mRNA domain containing 2a.	0.833
W5NG82_LEPOC	polr2a	ENSLOCP00000019641	ENSLOCP00000017105	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
W5NG82_LEPOC	polr2b	ENSLOCP00000019641	ENSLOCP00000014052	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.984
W5NG82_LEPOC	polr2c	ENSLOCP00000019641	ENSLOCP00000003805	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.976
W5NG82_LEPOC	polr2d	ENSLOCP00000019641	ENSLOCP00000011102	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.920
W5NG82_LEPOC	polr2e	ENSLOCP00000019641	ENSLOCP00000005510	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RNA polymerase II subunit E.	0.969
W5NG82_LEPOC	polr2f	ENSLOCP00000019641	ENSLOCP00000014541	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.947
W5NG82_LEPOC	rpap2	ENSLOCP00000019641	ENSLOCP00000005666	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RNA polymerase II associated protein 2.	0.993
W5NG82_LEPOC	rprd1b	ENSLOCP00000019641	ENSLOCP00000001294	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Regulation of nuclear pre-mRNA domain containing 1B.	0.920
polr2a	W5MHD1_LEPOC	ENSLOCP00000017105	ENSLOCP00000007790	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Regulation of nuclear pre-mRNA domain containing 2a.	0.830