Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LYV5_LEPOCReverse transcriptase domain-containing protein. (638 aa)    
Predicted Functional Partners:
W5MYT5_LEPOC
Reverse transcriptase domain-containing protein.
  
     0.496
W5NFA2_LEPOC
Uncharacterized protein.
  
     0.486
rag2
Recombination activating gene 2.
   
 0.476
bard1
BRCA1 associated RING domain 1.
    
 0.466
W5NH04_LEPOC
Uncharacterized protein.
  
     0.463
W5NKA4_LEPOC
Uncharacterized protein.
  
     0.461
W5NMA5_LEPOC
Uncharacterized protein.
  
     0.461
W5NNY6_LEPOC
Uncharacterized protein.
  
     0.432
rps27a
Ribosomal protein S27a.
    
  0.430
W5M2L8_LEPOC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.421
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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