STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107079404Ig-like domain-containing protein. (325 aa)    
Predicted Functional Partners:
LOC102689437
Uncharacterized protein.
   
 0.784
W5MKJ4_LEPOC
Protein tyrosine phosphatase non-receptor type 11b.
   
 0.683
W5MLN9_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.683
W5MLP2_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.683
LOC102690647
TNFR-Cys domain-containing protein.
   
 0.676
LOC102697660
TNFR-Cys domain-containing protein.
   
 0.672
ENSLOCP00000001232
annotation not available
   
 0.672
TNFRSF6B
TNF receptor superfamily member 6b.
   
 0.672
W5MKS4_LEPOC
Uncharacterized protein.
   
 0.672
LOC107075725
TNFR-Cys domain-containing protein.
   
 0.672
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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