STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LYW5_LEPOCPUB domain-containing protein. (133 aa)    
Predicted Functional Partners:
otulin
OTU deubiquitinase with linear linkage specificity b.
    
 0.960
W5MI33_LEPOC
RanBP-type and C3HC4-type zinc finger containing 1.
   
 0.954
sharpin
Sharpin and rbck1 related.
   
 0.954
W5MIV7_LEPOC
Death domain-containing protein.
    
 0.953
W5N311_LEPOC
Si:dkey-181m9.8.
 
   
  0.933
rps27a
Ribosomal protein S27a.
   
 0.898
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.830
W5N5X9_LEPOC
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.823
W5N321_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
  0.815
tbk1
TANK-binding kinase 1.
    
  0.815
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.