Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
u2af1U2 small nuclear RNA auxiliary factor 1. (192 aa)    
Predicted Functional Partners:
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.999
LOC102692451
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.992
srsf1
Serine and arginine rich splicing factor 1b.
   
 0.989
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.985
srsf9
Serine and arginine rich splicing factor 9.
   
 0.961
srsf3
Serine and arginine rich splicing factor 3a.
   
 0.961
sf3b1
Splicing factor 3b, subunit 1.
   
 0.956
rnps1
RNA binding protein S1, serine-rich domain.
   
 0.954
LOC107076440
PSP domain-containing protein.
   
 0.939
sf3a2
Splicing factor 3a, subunit 2.
   
 
 0.939
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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