Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LYY7_LEPOCtRNA methyltransferase subunit 11-2. (91 aa)    
Predicted Functional Partners:
W5MXZ8_LEPOC
N-6 adenine-specific DNA methyltransferase 1.
    
 0.998
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.997
trmt11
tRNA methyltransferase 11 homolog.
   
 0.991
W5M9X6_LEPOC
Methyltransferase like 27.
   
 0.974
thumpd3
THUMP domain containing 3.
    
 0.972
mettl5
Methyltransferase like 5.
    
 
 0.967
alkbh8
AlkB homolog 8, tRNA methyltransferase.
   
 
 0.956
dimt1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.950
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.935
trmt9b
tRNA methyltransferase 9B.
   
 0.935
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.