Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZ11_LEPOCNeuronal cell adhesion molecule a. (1337 aa)    
Predicted Functional Partners:
cntn1
Contactin 1b.
   
0.970
cntn2
Contactin 2.
   
 0.826
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.739
cntn5
Contactin 5.
   
 0.721
LOC102693751
Contactin 4.
   
 0.721
W5MUH2_LEPOC
Uncharacterized protein.
   
 0.721
LOC102694086
Contactin 3b.
   
 0.721
fam151b
Family with sequence similarity 151 member B.
   
 
 0.705
ptprg
Protein tyrosine phosphatase receptor type Ga.
    
 
 0.668
IQANK1
IQ motif and ankyrin repeat containing 1.
    
 0.653
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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