STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LZ20_LEPOCMelanocyte-stimulating hormone receptor. (330 aa)    
Predicted Functional Partners:
pomc
Proopiomelanocortin b.
    
 0.994
W5MJZ4_LEPOC
Agouti signaling protein 1.
     
 0.939
gnal
Uncharacterized protein.
    
 0.900
W5NP99_LEPOC
Melanocortin 3 receptor.
  
  
0.877
mc5r
Melanocortin 5a receptor.
  
  
0.871
W5NNQ3_LEPOC
Melanocortin 4 receptor.
  
  
0.867
W5NMQ4_LEPOC
Uncharacterized protein.
    
 0.849
LOC102696549
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
     
 0.849
mc2r
Melanocortin 2 receptor.
  
  
 
0.842
oca2
Oculocutaneous albinism II.
      
 0.719
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.