STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LZ25_LEPOCGlycerophosphodiester phosphodiesterase domain containing 1. (316 aa)    
Predicted Functional Partners:
crls1
Cardiolipin synthase 1.
   
 0.904
prpf31
PRP31 pre-mRNA processing factor 31 homolog (yeast).
 
      0.890
pla2g4a
Phospholipase A2.
   
 
 0.880
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
  
 
 0.868
pla2g10
Phospholipase A(2).
     
 0.867
W5MF14_LEPOC
Protein interacting with cyclin A1.
    
  0.865
W5MLJ2_LEPOC
Phospholipase A2 group III.
    
  0.865
PLA2G12B
Phospholipase A2, group XIIB.
    
  0.865
pla2g12a
Phospholipase A2, group XIIA.
    
  0.865
LOC102688887
Retinoic acid receptor responder 3-like.
    
 0.862
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.