Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uncxUNC homeobox. (498 aa)    
Predicted Functional Partners:
otp
Orthopedia homeobox a.
   
  
 0.915
ALX3
ALX homeobox 3.
   
  
 0.899
arx
Aristaless related homeobox b.
   
    0.832
W5MP09_LEPOC
YqaJ domain-containing protein.
   
  
 0.753
LOC102684999
Uncharacterized protein.
   
    0.725
foxp4
Forkhead box P4.
      
 0.718
W5MB37_LEPOC
Uncharacterized protein.
    
 
 0.680
nhlh2
Nescient helix loop helix 2.
   
 0.650
W5MTQ7_LEPOC
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.644
W5N0B4_LEPOC
Uncharacterized protein; Belongs to the NDK family.
    
   0.644
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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