STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uncxUNC homeobox. (498 aa)    
Predicted Functional Partners:
ldb2
LIM domain binding 2a.
    
 0.541
ldb1
LIM domain binding 1a.
    
 0.541
srf
Serum response factor b.
    
 0.532
nhlh2
Nescient helix loop helix 2.
   
 0.490
UNC119
Unc-119 homolog b (C. elegans).
      
 0.469
W5MB37_LEPOC
Uncharacterized protein.
    
 
 0.458
en2
Homeobox protein engrailed-like.
   
0.455
TCF4
Transcription factor 4.
    
  0.444
W5MFW8_LEPOC
Transcription factor 3a.
    
  0.444
tcf12
Transcription factor 12.
    
  0.444
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.