Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZ37_LEPOCChorein_N domain-containing protein. (195 aa)    
Predicted Functional Partners:
W5LZ16_LEPOC
C2H2-type domain-containing protein.
 
     0.920
ulk2
Unc-51 like autophagy activating kinase 2.
   
 
 0.796
ulk1
Unc-51 like autophagy activating kinase 1a.
   
 
 0.796
LOC102693433
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.794
atg9a
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.794
wipi2
WD repeat domain, phosphoinositide interacting 2.
    
 
 0.776
wipi1
WD repeat domain, phosphoinositide interacting 1.
    
 
 0.776
W5N310_LEPOC
WD repeat domain 45B.
    
 
 0.657
wdr45
WD repeat domain 45.
    
 
 0.657
trappc8
Trafficking protein particle complex 8.
   
 
 0.599
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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