STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryaaCrystallin, alpha A; Belongs to the small heat shock protein (HSP20) family. (176 aa)    
Predicted Functional Partners:
cryab
Crystallin, alpha B, b; Belongs to the small heat shock protein (HSP20) family.
    
0.989
cryba1
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
 
 0.894
hspb1
Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family.
   
0.856
W5M5W8_LEPOC
Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family.
   
0.856
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
 
 0.835
W5M936_LEPOC
Crystallin, gamma S1; Belongs to the beta/gamma-crystallin family.
   
 
 0.766
cryba2
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
   
  
 0.749
LOC102695690
Heat shock cognate 70-kd protein, tandem duplicate 1; Belongs to the heat shock protein 70 family.
   
 0.651
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
   
 0.651
tmem59
Transmembrane protein 59.
   
 0.651
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.