Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mfsd12Major facilitator superfamily domain containing 12a. (493 aa)    
Predicted Functional Partners:
ctns
Cystinosin, lysosomal cystine transporter.
      
 0.729
tlcd3a
TLC domain containing 3A.
      
 0.725
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.720
W5MWT4_LEPOC
Uncharacterized protein.
      
 0.694
W5N6Q5_LEPOC
Major facilitator superfamily domain containing 6-like.
      
 0.690
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.684
ppp1r16a
Protein phosphatase 1, regulatory subunit 16A.
      
 0.680
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.676
tyms
Thymidylate synthetase.
    
  0.673
tmem243
Transmembrane protein 243, mitochondrial a.
      
 0.673
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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