Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf362Zinc finger protein 362a. (447 aa)    
Predicted Functional Partners:
W5MUV6_LEPOC
NGFI-A binding protein 1a (EGR1 binding protein 1).
    
 0.928
znf512
Zinc finger protein 512.
    
 0.749
rrp15
Ribosomal RNA processing 15 homolog.
      
 0.626
W5M9C4_LEPOC
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
      
 0.619
tbp
TATA box binding protein.
    
 0.558
lin28b
Lin-28 homolog B (C. elegans).
    
 
 0.551
APLF
Aprataxin and PNKP like factor.
    
 
 0.537
W5MTQ7_LEPOC
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.535
W5N0B4_LEPOC
Uncharacterized protein; Belongs to the NDK family.
    
 0.535
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.525
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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