STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf362Zinc finger protein 362a. (447 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.871
W5MUV6_LEPOC
NGFI-A binding protein 1a (EGR1 binding protein 1).
    
 0.716
znf512
Zinc finger protein 512.
    
 0.559
bard1
BRCA1 associated RING domain 1.
    
  0.513
tbp
TATA box binding protein.
    
 0.496
YTHDC2
YTH domain containing 2.
    
  0.484
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.480
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.478
CYB5R4
Cytochrome b5 reductase 4.
    
  0.478
W5N0P4_LEPOC
E1A binding protein p300 a.
    
 0.476
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.