STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl47Mitochondrial ribosomal protein L47. (253 aa)    
Predicted Functional Partners:
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.997
LOC102684237
Mitochondrial ribosomal protein L23.
   
 
 0.996
mrpl21
Mitochondrial ribosomal protein L21.
   
 
 0.995
W5N3Q7_LEPOC
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.995
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.994
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.994
mrps5
Mitochondrial ribosomal protein S5.
   
 
 0.993
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.993
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.992
W5NB71_LEPOC
MRP-L46 domain-containing protein.
   
 
 0.992
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.