Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl47Mitochondrial ribosomal protein L47. (253 aa)    
Predicted Functional Partners:
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 0.998
LOC102684237
Mitochondrial ribosomal protein L23.
   
 0.997
W5NB71_LEPOC
MRP-L46 domain-containing protein.
   
 0.997
mrpl19
Mitochondrial ribosomal protein L19.
   
 0.996
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.996
W5NDU5_LEPOC
Mitochondrial ribosomal protein L42.
   
 0.996
mrpl41
Mitochondrial ribosomal protein L41.
   
 0.996
mrpl1
Mitochondrial ribosomal protein L1.
   
 
 0.995
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.994
mrpl2
Mitochondrial ribosomal protein L2.
   
 0.994
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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