Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZC2_LEPOCUncharacterized protein. (356 aa)    
Predicted Functional Partners:
W5LYX9_LEPOC
Thr_synth_N domain-containing protein.
      
 0.596
THNSL1
Threonine synthase like 1.
      
 0.596
slc35d2
Solute carrier family 35 member D2.
      
 0.547
znf366
Zinc finger protein 366.
      
 0.541
DDRGK1
DDRGK domain containing 1.
      
 0.524
znf367
Zinc finger protein 367.
      
 0.518
pepd
Peptidase D.
    
 
 0.467
fastkd3
FAST kinase domains 3.
    
 
 0.467
abtb1
Ankyrin repeat and BTB (POZ) domain containing 1.
      
 0.450
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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