Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pbx3Homeobox domain-containing protein. (443 aa)    
Predicted Functional Partners:
hoxb6
Homeobox B6a.
    
 0.896
hoxc4
Homeobox C4a.
    
 0.884
HOXB1
Homeobox B1b.
    
 0.884
hoxb7
Homeobox B7a.
    
 0.844
hoxb5
Homeobox B5b.
    
 0.841
meis2
Meis homeobox 2b.
   
 0.828
meis1
Meis homeobox 1 b.
   
 0.828
hoxd1
Homeobox domain-containing protein.
    
 0.770
hoxa1
Homeobox A1a.
    
 0.770
LOC102687482
Homeobox domain-containing protein.
    
 0.731
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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