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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZD3_LEPOCCoiled-coil domain containing 30. (1218 aa)    
Predicted Functional Partners:
W5MTQ7_LEPOC
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.579
W5N0B4_LEPOC
Uncharacterized protein; Belongs to the NDK family.
   
 
 0.579
W5M6P3_LEPOC
WD repeat domain 90.
   
 0.508
mdh2
Malate dehydrogenase.
    
 0.504
traf7
TNF receptor-associated factor 7.
    
  0.440
RANBP2
RAN binding protein 2.
    
 0.438
W5MJW1_LEPOC
Enolase 1a, (alpha).
     
 0.430
LOC102698052
Enolase 2.
     
 0.430
W5MTL6_LEPOC
Enolase 4.
     
 0.430
LOC102685061
Si:dkey-12j5.1.
     
 0.430
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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