STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsf2bpHeat shock transcription factor 2 binding protein. (342 aa)    
Predicted Functional Partners:
W5MNK3_LEPOC
Tower domain-containing protein.
    
 
 0.927
swsap1
SWIM-type zinc finger 7 associated protein 1.
      
 0.562
rpa3
Replication protein A3.
      
 0.549
LOC102690867
Transmembrane protein 183A.
      
 0.543
CLSPN
Claspin.
      
 0.539
W5MEP5_LEPOC
Uncharacterized protein.
      
 0.539
spata22
Spermatogenesis associated 22.
      
 0.538
W5MP54_LEPOC
Synaptonemal complex central element protein 2.
      
 0.536
lrrc42
Leucine rich repeat containing 42.
      
 0.491
W5MEE1_LEPOC
PALB2_WD40 domain-containing protein.
    
 
 0.437
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.