Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZE2_LEPOCLisH domain-containing protein. (423 aa)    
Predicted Functional Partners:
LOC102684192
Zgc:112083.
    
 
 0.942
cramp1
Cramped chromatin regulator homolog 1.
    
 
 0.924
hinfp
Histone H4 transcription factor.
    
 
 0.860
ccne1
Cyclin E1; Belongs to the cyclin family.
    
 
 0.803
ccne2
Cyclin E2; Belongs to the cyclin family.
    
 
 0.803
W5MQE4_LEPOC
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.788
casp8ap2
Caspase 8 associated protein 2.
   
 
 0.751
W5M3F2_LEPOC
Zinc finger protein 219.
    
  0.740
znf536
Zinc finger protein 536.
    
  0.740
iqcb1
IQ motif containing B1.
    
 
 0.718
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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