STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emp3Epithelial membrane protein 3b. (166 aa)    
Predicted Functional Partners:
W5M8A3_LEPOC
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
   
    0.594
LOC102684964
Protein S100; Belongs to the S-100 family.
  
 
 0.550
LOC102690953
Galectin.
   
  
 0.547
W5N1G0_LEPOC
Galectin.
   
  
 0.547
W5MZU0_LEPOC
Galectin.
   
  
 0.487
W5MRY5_LEPOC
Galectin.
   
  
 0.468
W5NNN1_LEPOC
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
  
     0.412
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.