Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102692251Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
LOC107075870
Aamy domain-containing protein.
  
 0.964
slc3a1
Solute carrier family 3 member 1.
  
 0.738
LOC102684922
2-epi-5-epi-valiolone synthase.
   
 0.655
W5NCF4_LEPOC
Uncharacterized protein.
   
 0.619
W5ND28_LEPOC
Si:ch211-153b23.3.
   
 0.619
W5N2D4_LEPOC
Solute carrier family 25 member 38b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.618
W5LZ45_LEPOC
AlkB homolog 3, alpha-ketoglutarate-dependent dioxygenase.
   
 0.576
kiaa0513
Zgc:91860.
   
 0.576
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
   
 0.576
W5MMY2_LEPOC
Solute carrier family 43 member 1b.
   
  
 0.567
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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