Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC102696686 | trpt1 | ENSLOCP00000000057 | ENSLOCP00000001528 | Vitamin K epoxide reductase complex, subunit 1. | tRNA phosphotransferase 1. | 0.590 |
| W5M1C9_LEPOC | rtcb | ENSLOCP00000002186 | ENSLOCP00000020405 | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | 0.735 |
| W5M1C9_LEPOC | trpt1 | ENSLOCP00000002186 | ENSLOCP00000001528 | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | tRNA phosphotransferase 1. | 0.590 |
| W5M1C9_LEPOC | tsen2 | ENSLOCP00000002186 | ENSLOCP00000017207 | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] | 0.986 |
| W5M1C9_LEPOC | tsen54 | ENSLOCP00000002186 | ENSLOCP00000013751 | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | TSEN54 tRNA splicing endonuclease subunit. | 0.935 |
| W5N373_LEPOC | rtcb | ENSLOCP00000015082 | ENSLOCP00000020405 | Family with sequence similarity 98 member B. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | 0.978 |
| W5N373_LEPOC | trpt1 | ENSLOCP00000015082 | ENSLOCP00000001528 | Family with sequence similarity 98 member B. | tRNA phosphotransferase 1. | 0.564 |
| nudt22 | trpt1 | ENSLOCP00000001284 | ENSLOCP00000001528 | Nudix (nucleoside diphosphate linked moiety X)-type motif 22. | tRNA phosphotransferase 1. | 0.849 |
| pusl1 | trpt1 | ENSLOCP00000002577 | ENSLOCP00000001528 | tRNA pseudouridine synthase. | tRNA phosphotransferase 1. | 0.560 |
| rtca | rtcb | ENSLOCP00000000108 | ENSLOCP00000020405 | RNA 3'-terminal phosphate cyclase. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | 0.862 |
| rtca | trpt1 | ENSLOCP00000000108 | ENSLOCP00000001528 | RNA 3'-terminal phosphate cyclase. | tRNA phosphotransferase 1. | 0.558 |
| rtcb | W5M1C9_LEPOC | ENSLOCP00000020405 | ENSLOCP00000002186 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.735 |
| rtcb | W5N373_LEPOC | ENSLOCP00000020405 | ENSLOCP00000015082 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | Family with sequence similarity 98 member B. | 0.978 |
| rtcb | rtca | ENSLOCP00000020405 | ENSLOCP00000000108 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | RNA 3'-terminal phosphate cyclase. | 0.862 |
| rtcb | trpt1 | ENSLOCP00000020405 | ENSLOCP00000001528 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. | tRNA phosphotransferase 1. | 0.679 |
| trpt1 | LOC102696686 | ENSLOCP00000001528 | ENSLOCP00000000057 | tRNA phosphotransferase 1. | Vitamin K epoxide reductase complex, subunit 1. | 0.590 |
| trpt1 | W5M1C9_LEPOC | ENSLOCP00000001528 | ENSLOCP00000002186 | tRNA phosphotransferase 1. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.590 |
| trpt1 | W5N373_LEPOC | ENSLOCP00000001528 | ENSLOCP00000015082 | tRNA phosphotransferase 1. | Family with sequence similarity 98 member B. | 0.564 |
| trpt1 | nudt22 | ENSLOCP00000001528 | ENSLOCP00000001284 | tRNA phosphotransferase 1. | Nudix (nucleoside diphosphate linked moiety X)-type motif 22. | 0.849 |
| trpt1 | pusl1 | ENSLOCP00000001528 | ENSLOCP00000002577 | tRNA phosphotransferase 1. | tRNA pseudouridine synthase. | 0.560 |
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