Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102695650Poly(A) binding protein interacting protein 2B. (132 aa)    
Predicted Functional Partners:
ubr5
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.798
eif3j
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.617
CCDC69
Coiled-coil domain containing 69.
      
 0.514
W5M765_LEPOC
Eukaryotic translation initiation factor 4 gamma, 3b.
    
 
 0.502
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
    
 
 0.502
paip1
Poly(A) binding protein interacting protein 1.
    
 
 0.502
rc3h1
Ring finger and CCCH-type domains 1a.
    
   0.459
W5M8G5_LEPOC
Eukaryotic translation initiation factor 4, gamma 2a.
    
 
 0.447
pabpn1
Poly(A) binding protein, nuclear 1.
   
  
 0.417
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.