Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZI2_LEPOCUncharacterized protein. (463 aa)    
Predicted Functional Partners:
myb
V-myb avian myeloblastosis viral oncogene homolog.
 
    
 0.444
W5MBH1_LEPOC
THAP-type domain-containing protein.
  
 
  0.428
ube2i
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.416
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.416
LOC102683539
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.416
W5MZ98_LEPOC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.416
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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