STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZJ7_LEPOCLipoxygenase domain-containing protein. (83 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
   0.643
mapkapk2
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
     
  0.475
nipal4
NIPA like domain containing 4.
      
 0.459
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 
 0.455
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.433
LOC102699233
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.415
mapkapk3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
     
  0.407
W5NCX0_LEPOC
Tetratricopeptide repeat domain 41.
    
  0.402
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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