STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (436 aa)    
Predicted Functional Partners:
ift74
Intraflagellar transport 74.
    
 0.998
cluap1
Clusterin associated protein 1.
   
 0.998
ift80
Uncharacterized protein.
    
 0.998
ift46
Intraflagellar transport 46 homolog (Chlamydomonas).
    
 0.998
ift81
Intraflagellar transport 81 homolog.
    
 0.998
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
   
 0.998
W5MY78_LEPOC
Intraflagellar transport 88 homolog.
  
 
 0.997
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.996
LOC102687908
Fleer.
    
 0.995
W5NFZ6_LEPOC
Intraflagellar transport 172.
    
 0.992
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.