Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctnnb1Catenin (cadherin-associated protein), beta 1. (780 aa)    
Predicted Functional Partners:
cdh5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.999
ctnnbip1
Catenin, beta interacting protein 1.
    
 0.999
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.999
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
   
 0.999
lef1
Lymphoid enhancer-binding factor 1.
    
 0.999
LOC102695806
Junction plakoglobin b.
  
0.999
amer1
APC membrane recruitment protein 1.
    
 0.999
W5LXX5_LEPOC
Axin 1.
    
 0.998
cdh1
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.998
W5MC12_LEPOC
Uncharacterized protein.
   
 0.998
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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