Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107079724Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
nprl3
NPR3-like, GATOR1 complex subunit.
   
 0.982
W5NA75_LEPOC
NPR2 like, GATOR1 complex subunit.
    
 0.979
wdr24
WD repeat domain 24.
   
 0.971
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.971
W5LZS7_LEPOC
WD repeat domain 59.
   
 0.964
clg8h12orf66
Si:ch211-125a15.1.
    
 0.961
W5NAD3_LEPOC
Kaptin (actin binding protein).
    
 0.953
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.951
LOC102690405
Ras-related GTP binding A.
    
 0.950
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.947
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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