Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZM6_LEPOCUncharacterized protein. (1294 aa)    
Predicted Functional Partners:
LOC102684964
Protein S100; Belongs to the S-100 family.
   
 0.788
rhbdd1
Rhomboid domain containing 1.
    
 
 0.689
agfg1
ArfGAP with FG repeats 1b.
      
 0.644
MSL3
MSL complex subunit 3.
    
 0.639
msl2
MSL complex subunit 2b.
    
 0.627
W5NAP2_LEPOC
SUMO1 activating enzyme subunit 1.
    
 
 0.617
W5NC51_LEPOC
Annexin.
   
 0.616
egr2
Early growth response 2b.
    
 0.615
ccnd1
Cyclin D1; Belongs to the cyclin family.
    
 0.611
nudcd1
NudC domain containing 1.
    
   0.591
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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