Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mad1l1Mitotic arrest deficient 1 like 1. (715 aa)    
Predicted Functional Partners:
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
    
 0.999
W5NJ26_LEPOC
Uncharacterized protein.
    
 0.997
W5NKC6_LEPOC
Ttk protein kinase.
    
 0.997
W5LZJ8_LEPOC
Fizzy/cell division cycle 20 related 1a.
   
 0.989
LOC102692087
Fizzy/cell division cycle 20 related 1b.
   
 0.989
bub3
BUB3 mitotic checkpoint protein.
    
 0.988
CDC20B
Cell division cycle 20B.
   
 0.978
cdc20
Cell division cycle 20 homolog.
   
 0.978
BUB1B
BUB1 N-terminal domain-containing protein.
    
 0.974
bag5
BCL2 associated athanogene 5.
    
   0.969
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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