STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxacb1Ferredoxin-fold anticodon binding domain containing 1. (267 aa)    
Predicted Functional Partners:
W5MI17_LEPOC
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.854
mtg2
Mitochondrial ribosome-associated GTPase 2.
 
 
    0.726
rrp8
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.670
W5N8N3_LEPOC
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.670
rpf2
Ribosome production factor 2 homolog.
   
    0.644
clg13h7orf50
Uncharacterized protein.
   
  
 0.584
dnttip2
Deoxynucleotidyltransferase, terminal, interacting protein 2.
   
  
 0.583
brix1
Brix domain containing 2.
   
  
 0.564
rrp36
Ribosomal RNA processing 36.
   
    0.537
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.528
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.