STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELESelectin P. (857 aa)    
Predicted Functional Partners:
glg1
Golgi glycoprotein 1b.
    
 0.923
W5MB04_LEPOC
Selectin P ligand.
     
 0.883
snx17
Sorting nexin 17.
    
 
 0.871
W5LZK3_LEPOC
Link domain-containing protein.
   
 0.821
ap2m1
AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]
    
   0.714
LOC102682923
Platelet/endothelial cell adhesion molecule 1.
   
 0.679
LOC102685166
Uncharacterized protein.
   
 
 0.666
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.660
cd63
Tetraspanin.
     
 0.589
W5NGH4_LEPOC
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 0.541
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.