LOC102685500 protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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[Homology]

Score

LOC102685500

Uncharacterized protein. (337 aa)

Predicted Functional Partners:

W5LVU4_LEPOC

0.934

W5LXG5_LEPOC

0.908

W5N222_LEPOC

0.908

GBGT1

0.906

hexb

0.902

hexa

0.902

B3GALNT1

0.900

lgr4

0.523

W5MI88_LEPOC

0.523

W5MNA3_LEPOC

0.523

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GALNT1	GBGT1	ENSLOCP00000004259	ENSLOCP00000004989	Hexosyltransferase.	Uncharacterized protein.	0.905
B3GALNT1	LOC102685500	ENSLOCP00000004259	ENSLOCP00000001609	Hexosyltransferase.	Uncharacterized protein.	0.900
B3GALNT1	W5LVU4_LEPOC	ENSLOCP00000004259	ENSLOCP00000000251	Hexosyltransferase.	Uncharacterized protein.	0.905
B3GALNT1	W5LXG5_LEPOC	ENSLOCP00000004259	ENSLOCP00000000822	Hexosyltransferase.	Uncharacterized protein.	0.905
B3GALNT1	W5N222_LEPOC	ENSLOCP00000004259	ENSLOCP00000014681	Hexosyltransferase.	Alpha-galactosidase.	0.901
B3GALNT1	hexa	ENSLOCP00000004259	ENSLOCP00000018433	Hexosyltransferase.	Hexosaminidase A (alpha polypeptide).	0.900
B3GALNT1	hexb	ENSLOCP00000004259	ENSLOCP00000013521	Hexosyltransferase.	Beta-hexosaminidase.	0.900
GBGT1	B3GALNT1	ENSLOCP00000004989	ENSLOCP00000004259	Uncharacterized protein.	Hexosyltransferase.	0.905
GBGT1	LOC102685500	ENSLOCP00000004989	ENSLOCP00000001609	Uncharacterized protein.	Uncharacterized protein.	0.906
GBGT1	W5LVU4_LEPOC	ENSLOCP00000004989	ENSLOCP00000000251	Uncharacterized protein.	Uncharacterized protein.	0.907
GBGT1	W5LXG5_LEPOC	ENSLOCP00000004989	ENSLOCP00000000822	Uncharacterized protein.	Uncharacterized protein.	0.901
GBGT1	W5N222_LEPOC	ENSLOCP00000004989	ENSLOCP00000014681	Uncharacterized protein.	Alpha-galactosidase.	0.900
GBGT1	hexa	ENSLOCP00000004989	ENSLOCP00000018433	Uncharacterized protein.	Hexosaminidase A (alpha polypeptide).	0.900
GBGT1	hexb	ENSLOCP00000004989	ENSLOCP00000013521	Uncharacterized protein.	Beta-hexosaminidase.	0.900
LOC102685500	B3GALNT1	ENSLOCP00000001609	ENSLOCP00000004259	Uncharacterized protein.	Hexosyltransferase.	0.900
LOC102685500	GBGT1	ENSLOCP00000001609	ENSLOCP00000004989	Uncharacterized protein.	Uncharacterized protein.	0.906
LOC102685500	W5LVU4_LEPOC	ENSLOCP00000001609	ENSLOCP00000000251	Uncharacterized protein.	Uncharacterized protein.	0.934
LOC102685500	W5LXG5_LEPOC	ENSLOCP00000001609	ENSLOCP00000000822	Uncharacterized protein.	Uncharacterized protein.	0.908
LOC102685500	W5MI88_LEPOC	ENSLOCP00000001609	ENSLOCP00000008097	Uncharacterized protein.	Uncharacterized protein.	0.523
LOC102685500	W5MNA3_LEPOC	ENSLOCP00000001609	ENSLOCP00000009862	Uncharacterized protein.	Relaxin family peptide receptor 1.	0.523