STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LZQ3_LEPOCProthymosin alpha a. (109 aa)    
Predicted Functional Partners:
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
  
 0.827
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
    0.787
W5M9U4_LEPOC
Ribosomal protein S19.
   
    0.763
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
    0.751
LOC102689289
Kelch-like ECH-associated protein 1a.
    
 
 0.743
W5MK67_LEPOC
Kelch-like family member 17.
    
 
 0.743
W5MLW6_LEPOC
Kelch-like ECH-associated protein 1b.
    
 
 0.743
klhl18
Kelch-like family member 18.
    
 
 0.743
hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
   0.731
rplp1
Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
    0.725
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.