zcrb1 protein (Lepisosteus oculatus) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

zcrb1

Zinc finger CCHC-type and RNA binding motif 1. (220 aa)

Predicted Functional Partners:

W5MMU1_LEPOC

0.950

zmat5

0.937

sf3b1

0.925

LOC107076440

0.921

snrpg

0.908

snrpd3

0.897

snrpd1

0.892

sf3b4

0.891

sf3b6

0.883

snrpe

0.815

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107076440	W5MMU1_LEPOC	ENSLOCP00000000090	ENSLOCP00000009700	PSP domain-containing protein.	RNA-binding region (RNP1, RRM) containing 3.	0.972
LOC107076440	sf3b1	ENSLOCP00000000090	ENSLOCP00000004663	PSP domain-containing protein.	Splicing factor 3b, subunit 1.	0.999
LOC107076440	sf3b4	ENSLOCP00000000090	ENSLOCP00000011024	PSP domain-containing protein.	Splicing factor 3b, subunit 4.	0.999
LOC107076440	sf3b6	ENSLOCP00000000090	ENSLOCP00000020359	PSP domain-containing protein.	Splicing factor 3b, subunit 6.	0.999
LOC107076440	snrpd1	ENSLOCP00000000090	ENSLOCP00000002311	PSP domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.997
LOC107076440	snrpd3	ENSLOCP00000000090	ENSLOCP00000008455	PSP domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.993
LOC107076440	snrpe	ENSLOCP00000000090	ENSLOCP00000014664	PSP domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.991
LOC107076440	snrpg	ENSLOCP00000000090	ENSLOCP00000019280	PSP domain-containing protein.	Small nuclear ribonucleoprotein G.	0.993
LOC107076440	zcrb1	ENSLOCP00000000090	ENSLOCP00000001613	PSP domain-containing protein.	Zinc finger CCHC-type and RNA binding motif 1.	0.921
LOC107076440	zmat5	ENSLOCP00000000090	ENSLOCP00000004362	PSP domain-containing protein.	Zinc finger, matrin-type 5.	0.987
W5MMU1_LEPOC	LOC107076440	ENSLOCP00000009700	ENSLOCP00000000090	RNA-binding region (RNP1, RRM) containing 3.	PSP domain-containing protein.	0.972
W5MMU1_LEPOC	sf3b1	ENSLOCP00000009700	ENSLOCP00000004663	RNA-binding region (RNP1, RRM) containing 3.	Splicing factor 3b, subunit 1.	0.976
W5MMU1_LEPOC	sf3b4	ENSLOCP00000009700	ENSLOCP00000011024	RNA-binding region (RNP1, RRM) containing 3.	Splicing factor 3b, subunit 4.	0.972
W5MMU1_LEPOC	sf3b6	ENSLOCP00000009700	ENSLOCP00000020359	RNA-binding region (RNP1, RRM) containing 3.	Splicing factor 3b, subunit 6.	0.975
W5MMU1_LEPOC	snrpd1	ENSLOCP00000009700	ENSLOCP00000002311	RNA-binding region (RNP1, RRM) containing 3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.970
W5MMU1_LEPOC	snrpd3	ENSLOCP00000009700	ENSLOCP00000008455	RNA-binding region (RNP1, RRM) containing 3.	Small nuclear ribonucleoprotein Sm D3.	0.980
W5MMU1_LEPOC	snrpe	ENSLOCP00000009700	ENSLOCP00000014664	RNA-binding region (RNP1, RRM) containing 3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.960
W5MMU1_LEPOC	snrpg	ENSLOCP00000009700	ENSLOCP00000019280	RNA-binding region (RNP1, RRM) containing 3.	Small nuclear ribonucleoprotein G.	0.979
W5MMU1_LEPOC	zcrb1	ENSLOCP00000009700	ENSLOCP00000001613	RNA-binding region (RNP1, RRM) containing 3.	Zinc finger CCHC-type and RNA binding motif 1.	0.950
W5MMU1_LEPOC	zmat5	ENSLOCP00000009700	ENSLOCP00000004362	RNA-binding region (RNP1, RRM) containing 3.	Zinc finger, matrin-type 5.	0.989