STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dok1Docking protein 1b. (585 aa)    
Predicted Functional Partners:
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
    
  0.971
rasa1
RAS p21 protein activator (GTPase activating protein) 1b.
    
 
 0.954
LOC102686356
Tyrosine-protein kinase.
    
 0.766
W5MDX6_LEPOC
C-abl oncogene 1, non-receptor tyrosine kinase.
    
 0.692
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.678
W5MJT7_LEPOC
V-crk avian sarcoma virus CT10 oncogene homolog.
    
 0.678
LOC102689667
Tyrosine-protein kinase.
    
 0.676
ptk6
Tyrosine-protein kinase.
    
 0.676
srms
Tyrosine-protein kinase.
    
 0.676
fyn
Tyrosine-protein kinase.
    
 0.676
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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