Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMTM6CKLF like MARVEL transmembrane domain containing 6. (200 aa)    
Predicted Functional Partners:
cmtm8
CKLF-like MARVEL transmembrane domain containing 8b.
      
 0.864
W5LZQ0_LEPOC
CKLF-like MARVEL transmembrane domain containing 7.
 
    
 0.852
CKLF
Chemokine like factor.
      
 0.815
cmtm4
CKLF-like MARVEL transmembrane domain containing 4.
    
 
 0.761
W5MDT9_LEPOC
Inversin.
     
 0.735
LOC102692212
Tetraspanin.
      
 0.702
cmtm3
CKLF-like MARVEL transmembrane domain containing 3.
   
  
 0.681
nelfcd
Negative elongation factor complex member C/D.
      
 0.627
CD274
CD274 molecule.
    
 
 0.557
thrap3
Uncharacterized protein.
   
  
 0.539
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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