Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5LZS2_LEPOCMitochondrial rRNA methyltransferase 2. (242 aa)    
Predicted Functional Partners:
mtg1
Mitochondrial ribosome-associated GTPase 1.
   
 
 0.976
malsu1
Si:zfos-1192g2.3.
    
 
 0.944
mterf4
Mitochondrial transcription termination factor 4.
    
 
 0.939
mtg2
Mitochondrial ribosome-associated GTPase 2.
  
 
 0.930
W5MQY4_LEPOC
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.919
W5NB71_LEPOC
MRP-L46 domain-containing protein.
    
 
 0.919
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.895
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.887
gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.882
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.881
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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